Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm23422-201ENSMUST00000102000 107 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm23910-201ENSMUST00000104597 132 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm25430-201ENSMUST00000157614 289 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm26172-201ENSMUST00000158421 134 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Mir6539-201ENSMUST00000183732 110 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm27409-201ENSMUST00000184727 80 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Mir7674-201ENSMUST00000184964 63 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm32340-201ENSMUST00000192883 259 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm37586-201ENSMUST00000193654 204 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Mir7227-201ENSMUST00000200408 59 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm10064-201ENSMUST00000071235 399 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm26447-201ENSMUST00000082448 129 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubp1Q811S7 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Ubp1Q811S7 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm11923-201ENSMUST00000118135 508 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm11550-201ENSMUST00000118210 699 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm11761-201ENSMUST00000121392 445 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Mir1970-201ENSMUST00000157839 104 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm24216-201ENSMUST00000158259 117 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm24940-201ENSMUST00000158326 108 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm22160-201ENSMUST00000158405 328 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Mir6417-201ENSMUST00000183815 116 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm43444-201ENSMUST00000198123 291 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Mir466e-201ENSMUST00000198862 84 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm43215-201ENSMUST00000199108 252 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm45101-201ENSMUST00000208327 232 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm33654-201ENSMUST00000221704 215 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm21937-201ENSMUST00000222825 218 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm23932-201ENSMUST00000082914 107 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubp1Q811S7 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.34□□□□□ -1.55
Ubp1Q811S7 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Ubp1Q811S7 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubp1Q811S7 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Ubp1Q811S7 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ubp1Q811S7 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.33□□□□□ -1.56
Ubp1Q811S7 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ubp1Q811S7 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms