Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm18117-201ENSMUST00000187720 742 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm37757-201ENSMUST00000193072 210 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm43214-201ENSMUST00000199242 352 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm44055-201ENSMUST00000204376 247 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm5322-201ENSMUST00000206142 699 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm22899-201ENSMUST00000104540 131 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm15012-201ENSMUST00000119176 106 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm23016-201ENSMUST00000158431 62 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm3470-201ENSMUST00000160819 420 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm26866-201ENSMUST00000180414 802 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm10105-201ENSMUST00000184601 270 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm29228-201ENSMUST00000185489 418 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm7858-201ENSMUST00000190177 622 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm5731-201ENSMUST00000190969 481 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm43144-201ENSMUST00000198256 485 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm44041-201ENSMUST00000203678 396 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm2522-201ENSMUST00000204280 322 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm34224-201ENSMUST00000204606 364 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm44870-201ENSMUST00000207291 357 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm25008-201ENSMUST00000083809 81 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm6177-201ENSMUST00000085589 465 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Trim56Q80VI1 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.61□□□□□ -1.51
Trim56Q80VI1 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim56Q80VI1 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm22675-201ENSMUST00000158430 104 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm20657-201ENSMUST00000177079 515 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm5558-201ENSMUST00000178933 495 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm18791-201ENSMUST00000204611 726 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm45105-201ENSMUST00000207824 397 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm17990-201ENSMUST00000211728 553 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm25853-201ENSMUST00000082793 132 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms