Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cln3Q61124 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm13664-201ENSMUST00000117304 345 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm14753-201ENSMUST00000118503 246 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm14838-201ENSMUST00000118913 248 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm15112-201ENSMUST00000120152 860 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm25106-201ENSMUST00000122672 134 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm14298-201ENSMUST00000139032 237 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm16356-201ENSMUST00000143300 169 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm25956-201ENSMUST00000175115 217 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm28860-201ENSMUST00000188103 313 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm7721-201ENSMUST00000200446 546 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.86□□□□□ -1.47
Cln3Q61124 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm22974-201ENSMUST00000083301 103 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cln3Q61124 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.85□□□□□ -1.47
Cln3Q61124 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cln3Q61124 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm12722-201ENSMUST00000118507 493 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm15195-201ENSMUST00000118775 263 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm11369-201ENSMUST00000120812 318 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm15786-201ENSMUST00000121079 450 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm23534-201ENSMUST00000157539 97 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Cln3Q61124 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm23796-201ENSMUST00000084011 160 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.85□□□□□ -1.47
Cln3Q61124 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.85□□□□□ -1.47
Cln3Q61124 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cln3Q61124 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cln3Q61124 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cln3Q61124 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cln3Q61124 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cln3Q61124 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cln3Q61124 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Cln3Q61124 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cln3Q61124 Gm15981-201ENSMUST00000119196 457 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.84□□□□□ -1.47
Cln3Q61124 Gm24186-201ENSMUST00000157983 127 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm8214-201ENSMUST00000172123 351 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm29014-201ENSMUST00000191422 326 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm37568-201ENSMUST00000191755 364 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.84□□□□□ -1.47
Cln3Q61124 Gm43855-201ENSMUST00000197462 507 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.84□□□□□ -1.47
Cln3Q61124 Gm42459-201ENSMUST00000199679 742 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms