Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm26439-201ENSMUST00000082592 106 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm25004-201ENSMUST00000083811 161 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Mir667-201ENSMUST00000102441 92 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm23178-201ENSMUST00000116782 95 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm14518-201ENSMUST00000117351 542 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm12782-201ENSMUST00000117519 727 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm23465-201ENSMUST00000157134 262 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm25665-201ENSMUST00000157695 110 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Scarna6-201ENSMUST00000158656 265 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm2862-201ENSMUST00000161524 328 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm18486-201ENSMUST00000184040 298 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm7634-201ENSMUST00000185778 553 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm29598-201ENSMUST00000188996 588 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm8823-201ENSMUST00000193158 433 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm9379-201ENSMUST00000196790 646 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm43239-201ENSMUST00000200131 201 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm43954-201ENSMUST00000204634 544 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Platr25-208ENSMUST00000222602 939 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Mir30e-201ENSMUST00000083475 92 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav3-3Q5R1C3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Trav3-3Q5R1C3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Trav3-3Q5R1C3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Trav3-3Q5R1C3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Trav3-3Q5R1C3 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.65□□□□□ -1.98
Trav3-3Q5R1C3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm13614-201ENSMUST00000117306 503 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm16017-201ENSMUST00000119834 208 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm12578-201ENSMUST00000121244 417 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm11692-201ENSMUST00000122121 902 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm22637-201ENSMUST00000158144 283 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm22521-201ENSMUST00000158272 134 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm25438-201ENSMUST00000158281 110 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm22529-201ENSMUST00000158817 123 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm28623-201ENSMUST00000187219 192 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm42593-201ENSMUST00000198469 377 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm42502-201ENSMUST00000198550 1089 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm44274-201ENSMUST00000203417 256 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm20177-201ENSMUST00000203705 334 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm45273-201ENSMUST00000211559 281 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm35857-201ENSMUST00000212739 178 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm18015-201ENSMUST00000214879 316 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 AC140930.4-201ENSMUST00000220750 150 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 AC132112.1-201ENSMUST00000226354 505 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm22293-201ENSMUST00000083314 109 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Trav3-3Q5R1C3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms