Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm45367-201ENSMUST00000210171 347 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm45742-201ENSMUST00000212400 433 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm35262-201ENSMUST00000215133 267 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm23447-201ENSMUST00000082798 163 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Mir128-1-201ENSMUST00000083586 70 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm23747-201ENSMUST00000104228 131 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm24788-201ENSMUST00000104283 156 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm14973-201ENSMUST00000117248 255 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm7916-201ENSMUST00000120325 456 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm15946-201ENSMUST00000160654 423 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm17155-201ENSMUST00000165969 473 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm21729-201ENSMUST00000180058 664 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm21853-201ENSMUST00000180071 664 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm29495-201ENSMUST00000189319 664 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm45080-201ENSMUST00000206648 283 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm44824-201ENSMUST00000207021 229 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm45366-201ENSMUST00000209828 384 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm18113-201ENSMUST00000220630 303 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.25□□□□□ -1.57
Rnf180Q3U827 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf180Q3U827 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm12935-201ENSMUST00000119352 246 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm15060-201ENSMUST00000119550 948 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm14577-201ENSMUST00000121134 256 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Mup-ps22-201ENSMUST00000121611 243 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm23326-201ENSMUST00000157419 105 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm22380-201ENSMUST00000157479 95 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm3030-201ENSMUST00000163410 516 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm22166-201ENSMUST00000178419 121 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm23288-201ENSMUST00000179213 121 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Mir6996-201ENSMUST00000183922 61 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm27899-201ENSMUST00000184715 64 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm4557-201ENSMUST00000185826 907 ntBASIC5.24□□□□□ -1.57
Rnf180Q3U827 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC5.24□□□□□ -1.57
Rnf180Q3U827 Gm8708-201ENSMUST00000188500 906 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms