Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm15714-201ENSMUST00000117168 250 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm11923-201ENSMUST00000118135 508 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm28660-201ENSMUST00000186496 253 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm20776-201ENSMUST00000189940 700 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm19104-201ENSMUST00000198392 679 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm23302-201ENSMUST00000082710 100 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Mir682-201ENSMUST00000102281 96 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 n-R5s45-201ENSMUST00000122592 110 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm18433-202ENSMUST00000195682 196 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm29167-201ENSMUST00000190024 377 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm9435-201ENSMUST00000120379 877 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm12858-201ENSMUST00000121913 208 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm24213-201ENSMUST00000158255 258 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm5917-201ENSMUST00000217638 721 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Mir200b-201ENSMUST00000083615 70 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC2.88□□□□□ -1.95
Col6a3E9PWQ3 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm15022-201ENSMUST00000122074 746 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm13607-201ENSMUST00000117875 539 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm27158-201ENSMUST00000183813 238 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm19224-201ENSMUST00000190477 793 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm36931-201ENSMUST00000192997 4801 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm45654-201ENSMUST00000210980 123 ntBASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Col6a3E9PWQ3 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm24291-201ENSMUST00000157633 162 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm18604-201ENSMUST00000172535 558 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm43406-201ENSMUST00000200356 334 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 AC118230.1-201ENSMUST00000220196 656 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm43704-201ENSMUST00000196164 496 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm5552-201ENSMUST00000197149 515 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm43210-201ENSMUST00000196743 6152 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Gm42996-201ENSMUST00000196116 1636 ntBASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Col6a3E9PWQ3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 AC122301.1-201ENSMUST00000219625 507 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm10723-201ENSMUST00000195366 6918 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm29602-201ENSMUST00000186887 442 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm18672-201ENSMUST00000208035 270 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms