Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm44355-201ENSMUST00000200417 104 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm44513-201ENSMUST00000206811 439 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm18193-201ENSMUST00000210017 772 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm45778-201ENSMUST00000211959 153 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Gm25630-201ENSMUST00000084000 162 ntBASIC3.23□□□□□ -1.89
Lsm1Q8VC85 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm13614-201ENSMUST00000117306 503 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm15783-201ENSMUST00000117521 633 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm13379-201ENSMUST00000118053 621 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm12691-201ENSMUST00000120186 456 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm15142-201ENSMUST00000121013 856 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm15147-201ENSMUST00000122263 483 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm24961-201ENSMUST00000157918 184 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm10075-201ENSMUST00000162030 545 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm19898-201ENSMUST00000177490 251 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm28785-201ENSMUST00000187478 379 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm37164-201ENSMUST00000192809 637 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm18747-201ENSMUST00000198129 648 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm45189-201ENSMUST00000208567 363 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm39147-201ENSMUST00000211376 465 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm24611-201ENSMUST00000083272 107 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm26176-201ENSMUST00000083795 105 ntBASIC3.22□□□□□ -1.89
Lsm1Q8VC85 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.22□□□□□ -1.89
Lsm1Q8VC85 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.21□□□□□ -1.89
Lsm1Q8VC85 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
Lsm1Q8VC85 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm15108-201ENSMUST00000116160 803 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm11905-201ENSMUST00000117653 678 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm12587-201ENSMUST00000120180 427 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm15111-201ENSMUST00000122142 878 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm15116-201ENSMUST00000122248 663 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm27592-201ENSMUST00000157729 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm16147-201ENSMUST00000162143 373 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm22174-201ENSMUST00000175050 125 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm22692-201ENSMUST00000175055 125 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm27634-201ENSMUST00000175060 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm22460-201ENSMUST00000175269 124 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm26141-201ENSMUST00000175299 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm25535-201ENSMUST00000175364 125 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm24365-201ENSMUST00000175384 125 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm44310-201ENSMUST00000175424 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm22639-201ENSMUST00000175591 125 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm24979-201ENSMUST00000178626 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm26988-201ENSMUST00000183296 945 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm27743-201ENSMUST00000185136 126 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm37417-201ENSMUST00000195257 454 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm43115-201ENSMUST00000196244 160 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm34091-201ENSMUST00000200875 604 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm44425-201ENSMUST00000203739 429 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm3189-201ENSMUST00000205595 832 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm6112-201ENSMUST00000208037 629 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm7119-201ENSMUST00000221345 695 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm10237-201ENSMUST00000078393 273 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lsm1Q8VC85 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms