Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.32□□□□□ -1.56
Trim28Q62318 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim28Q62318 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim28Q62318 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Trim28Q62318 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim28Q62318 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim28Q62318 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Mir690-201ENSMUST00000102110 109 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim28Q62318 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm11943-201ENSMUST00000119473 327 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm13471-201ENSMUST00000122057 433 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm25898-201ENSMUST00000158303 106 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm23198-201ENSMUST00000158811 91 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim28Q62318 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm18448-201ENSMUST00000186286 599 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm29668-201ENSMUST00000187802 315 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm44990-201ENSMUST00000203922 217 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm25592-201ENSMUST00000082635 131 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm24921-201ENSMUST00000083024 107 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm23242-201ENSMUST00000083055 107 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm25200-201ENSMUST00000083094 130 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm25004-201ENSMUST00000083811 161 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim28Q62318 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim28Q62318 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim28Q62318 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim28Q62318 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim28Q62318 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trim28Q62318 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.31□□□□□ -1.56
Trim28Q62318 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trim28Q62318 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim28Q62318 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trim28Q62318 Gm22072-201ENSMUST00000116850 121 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Mir669i-201ENSMUST00000117007 127 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm6893-201ENSMUST00000118385 522 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm11403-201ENSMUST00000122195 369 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim28Q62318 Gm6395-201ENSMUST00000167639 691 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Trim28Q62318 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim28Q62318 Gm29216-201ENSMUST00000187117 492 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm45226-201ENSMUST00000206602 288 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Gm8745-201ENSMUST00000207846 782 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.3□□□□□ -1.56
Trim28Q62318 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Trim28Q62318 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim28Q62318 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim28Q62318 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Trim28Q62318 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim28Q62318 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim28Q62318 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Trim28Q62318 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm26418-201ENSMUST00000104275 137 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms