Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm17412-201ENSMUST00000179261 468 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm26915-201ENSMUST00000183080 748 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm27952-201ENSMUST00000184748 105 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm28113-201ENSMUST00000188280 229 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm28724-202ENSMUST00000194218 295 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm4528-201ENSMUST00000207905 551 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm18672-201ENSMUST00000208035 270 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm18363-201ENSMUST00000221671 730 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Olfr895-201ENSMUST00000093864 951 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.34□□□□□ -1.87
Trav8d-2Q5R1B6 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm9078-201ENSMUST00000119126 617 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm11471-201ENSMUST00000121824 198 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm23792-201ENSMUST00000122557 93 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm23385-201ENSMUST00000158592 295 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm23402-201ENSMUST00000178130 107 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm26866-201ENSMUST00000180414 802 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm9541-201ENSMUST00000188409 502 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm25203-202ENSMUST00000200458 216 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm44521-201ENSMUST00000206469 217 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm22005-201ENSMUST00000082795 141 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm25203-201ENSMUST00000082842 215 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm26176-201ENSMUST00000083795 105 ntBASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav8d-2Q5R1B6 Gm7853-201ENSMUST00000100708 478 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm13359-201ENSMUST00000119000 695 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm15190-201ENSMUST00000120855 276 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14389-201ENSMUST00000140453 241 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm25185-201ENSMUST00000157754 96 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm22538-201ENSMUST00000158169 299 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm26214-201ENSMUST00000158581 107 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm2092-201ENSMUST00000178887 639 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm2759-201ENSMUST00000179938 639 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Mir6393-201ENSMUST00000183709 94 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm7407-201ENSMUST00000208301 568 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Mir28a-201ENSMUST00000083560 86 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm24817-201ENSMUST00000093672 105 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms