Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm20923-201ENSMUST00000190009 319 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm43804-201ENSMUST00000198280 456 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm44655-201ENSMUST00000207768 423 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm45735-201ENSMUST00000212779 319 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.53□□□□□ -1.52
Col6a1Q04857 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Col6a1Q04857 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a1Q04857 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a1Q04857 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm25726-201ENSMUST00000104529 129 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm11409-201ENSMUST00000118621 403 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm14980-201ENSMUST00000121247 736 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm12413-201ENSMUST00000121508 312 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm22842-201ENSMUST00000157709 118 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm25184-201ENSMUST00000157753 163 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm22177-201ENSMUST00000175002 158 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm22716-201ENSMUST00000177596 107 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm25194-201ENSMUST00000177987 79 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm24415-201ENSMUST00000180218 107 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm29228-201ENSMUST00000185489 418 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm18403-201ENSMUST00000192907 529 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm10048-201ENSMUST00000194196 372 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm37495-201ENSMUST00000194590 264 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Mir3970-201ENSMUST00000199287 90 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm45146-201ENSMUST00000207108 221 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.52□□□□□ -1.53
Col6a1Q04857 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm7822-201ENSMUST00000222433 581 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a1Q04857 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.52□□□□□ -1.53
Col6a1Q04857 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a1Q04857 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm24715-201ENSMUST00000102377 95 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm13439-201ENSMUST00000117541 409 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm2005-201ENSMUST00000120759 542 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm23206-201ENSMUST00000122720 184 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm25150-201ENSMUST00000157121 60 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm25846-201ENSMUST00000158013 135 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm20415-201ENSMUST00000172877 423 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm14527-201ENSMUST00000179300 639 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm23144-201ENSMUST00000180226 107 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm28097-201ENSMUST00000187333 366 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm43710-201ENSMUST00000199583 452 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm22423-201ENSMUST00000082861 184 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.51□□□□□ -1.53
Col6a1Q04857 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a1Q04857 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms