Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox1P53783 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox1P53783 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm15951-201ENSMUST00000118377 400 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm12281-201ENSMUST00000119536 298 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm14765-201ENSMUST00000121954 326 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm22345-201ENSMUST00000122644 107 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm25428-201ENSMUST00000157608 114 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm22336-201ENSMUST00000157719 107 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm24518-201ENSMUST00000180275 94 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm44820-201ENSMUST00000207420 396 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Gm9685-201ENSMUST00000211275 538 ntBASIC5.3□□□□□ -1.56
Sox1P53783 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.3□□□□□ -1.56
Sox1P53783 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Gm23848-201ENSMUST00000083826 106 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox1P53783 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.3□□□□□ -1.56
Sox1P53783 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox1P53783 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.29□□□□□ -1.56
Sox1P53783 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Gm23481-201ENSMUST00000104173 131 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm24338-201ENSMUST00000104205 127 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm23653-201ENSMUST00000116751 97 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm23988-201ENSMUST00000117034 122 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm5757-201ENSMUST00000117494 528 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm12486-201ENSMUST00000120887 541 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm11506-201ENSMUST00000122414 470 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm25966-201ENSMUST00000157169 117 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Gm27193-201ENSMUST00000184217 586 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Gm44474-201ENSMUST00000196525 127 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Mir7227-201ENSMUST00000200408 59 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Sox1P53783 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox1P53783 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.29□□□□□ -1.56
Sox1P53783 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Sox1P53783 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Sox1P53783 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox1P53783 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox1P53783 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox1P53783 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox1P53783 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Sox1P53783 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms