Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm11221-201ENSMUST00000117230 597 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm11908-201ENSMUST00000117755 347 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm4989-201ENSMUST00000118711 749 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm15211-201ENSMUST00000118932 528 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm23965-201ENSMUST00000157969 142 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm23258-201ENSMUST00000158319 106 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm22122-201ENSMUST00000175147 200 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm9457-201ENSMUST00000180176 372 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm27855-201ENSMUST00000184122 128 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm28094-201ENSMUST00000185262 390 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm28353-201ENSMUST00000186482 570 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm28533-201ENSMUST00000186741 570 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm28098-201ENSMUST00000191361 699 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm42539-201ENSMUST00000197009 308 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Mir409-201ENSMUST00000198153 79 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm35648-201ENSMUST00000202304 475 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm8039-201ENSMUST00000204758 712 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm45590-201ENSMUST00000209715 262 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.44□□□□□ -1.7
Hoxd4P10628 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm2645-201ENSMUST00000223516 547 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hoxd4P10628 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hoxd4P10628 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm25213-201ENSMUST00000102388 113 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm22266-201ENSMUST00000104011 138 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm14107-201ENSMUST00000117774 330 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm15531-201ENSMUST00000118062 252 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm7429-201ENSMUST00000118664 348 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm12053-201ENSMUST00000119022 252 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm14815-201ENSMUST00000120060 488 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm24306-201ENSMUST00000180229 79 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm42672-201ENSMUST00000197821 352 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm38670-201ENSMUST00000199248 77 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm45365-201ENSMUST00000209489 256 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm8423-201ENSMUST00000211387 607 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm6474-201ENSMUST00000223250 699 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm8724-201ENSMUST00000081668 483 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm25929-201ENSMUST00000082784 107 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm26206-201ENSMUST00000082908 110 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm23508-201ENSMUST00000083079 72 ntBASIC4.43□□□□□ -1.7
Hoxd4P10628 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hoxd4P10628 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Hoxd4P10628 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd4P10628 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd4P10628 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd4P10628 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hoxd4P10628 Mir466h-201ENSMUST00000104748 81 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Gm15215-201ENSMUST00000117773 489 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Gm13259-201ENSMUST00000120792 456 ntBASIC4.42□□□□□ -1.7
Hoxd4P10628 Gm11894-201ENSMUST00000121579 328 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms