Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm28240-201ENSMUST00000187560 2053 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Col5a1O88207 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col5a1O88207 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm12090-201ENSMUST00000118692 758 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm13717-201ENSMUST00000119868 365 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm11387-201ENSMUST00000120266 772 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm13487-201ENSMUST00000122240 864 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm25642-201ENSMUST00000175137 66 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm20651-201ENSMUST00000177219 329 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm6140-201ENSMUST00000192494 966 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Trbv27-201ENSMUST00000193711 277 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm38217-201ENSMUST00000194358 910 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col5a1O88207 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 AC163621.2-201ENSMUST00000222229 682 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm22970-201ENSMUST00000083304 186 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col5a1O88207 Gm38212-201ENSMUST00000194081 2756 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col5a1O88207 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Col5a1O88207 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Col5a1O88207 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Col5a1O88207 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col5a1O88207 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm22500-201ENSMUST00000158982 99 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Mir6418-201ENSMUST00000185075 115 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm18921-201ENSMUST00000221798 366 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 AC156560.3-201ENSMUST00000222978 3841 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.85□□□□□ -1.95
Col5a1O88207 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Col5a1O88207 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm8260-201ENSMUST00000119230 353 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm25808-201ENSMUST00000122784 284 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm26028-201ENSMUST00000158660 294 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col5a1O88207 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.84□□□□□ -1.95
Col5a1O88207 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm25820-202ENSMUST00000197479 128 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm19885-201ENSMUST00000212853 343 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gm18388-201ENSMUST00000222339 557 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col5a1O88207 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Col5a1O88207 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Col5a1O88207 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Col5a1O88207 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col5a1O88207 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.84□□□□□ -1.95
Col5a1O88207 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Col5a1O88207 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Col5a1O88207 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Col5a1O88207 Gm22532-201ENSMUST00000158822 140 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Col5a1O88207 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col5a1O88207 Gm4761-201ENSMUST00000178086 582 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 Mir6401-201ENSMUST00000184499 109 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 Gm25820-201ENSMUST00000198589 127 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 Gm45200-201ENSMUST00000207434 919 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.84□□□□□ -1.96
Col5a1O88207 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col5a1O88207 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col5a1O88207 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
Col5a1O88207 Gm37970-201ENSMUST00000193865 1732 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col5a1O88207 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col5a1O88207 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
Col5a1O88207 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col5a1O88207 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col5a1O88207 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm7855-201ENSMUST00000137737 687 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms