Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm23140-201ENSMUST00000082487 107 ntBASIC2.93□□□□□ -1.94
Col6a3E9PWQ3 Gm22622-201ENSMUST00000082870 129 ntBASIC2.93□□□□□ -1.94
Col6a3E9PWQ3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a3E9PWQ3 BC022960-201ENSMUST00000119987 1815 ntBASIC2.93□□□□□ -1.94
Col6a3E9PWQ3 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm12568-201ENSMUST00000117362 624 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm13379-201ENSMUST00000118053 621 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm24898-201ENSMUST00000158133 106 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm10075-201ENSMUST00000162030 545 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm5527-201ENSMUST00000179821 642 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm8319-201ENSMUST00000205708 641 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm18026-201ENSMUST00000222789 727 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm45324-201ENSMUST00000211193 5638 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm17149-201ENSMUST00000164712 375 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm21960-201ENSMUST00000181924 452 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm26993-201ENSMUST00000182766 789 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm19596-201ENSMUST00000203685 739 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm26423-201ENSMUST00000104277 128 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm24840-201ENSMUST00000122603 147 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm8649-201ENSMUST00000181799 233 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Gm5058-201ENSMUST00000187331 463 ntBASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a3E9PWQ3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm12849-201ENSMUST00000120013 739 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm28263-201ENSMUST00000185884 400 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm43746-201ENSMUST00000200028 317 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm23927-201ENSMUST00000082466 215 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm37504-201ENSMUST00000192537 2374 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm9078-201ENSMUST00000119126 617 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a3E9PWQ3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Gm14848-201ENSMUST00000121850 467 ntBASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col6a3E9PWQ3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm21489-201ENSMUST00000189668 818 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm25004-201ENSMUST00000083811 161 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm37579-201ENSMUST00000194291 142 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.9□□□□□ -1.95
Col6a3E9PWQ3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm43466-201ENSMUST00000197836 5214 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm9836-201ENSMUST00000117132 216 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm14880-201ENSMUST00000117581 292 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gm45772-201ENSMUST00000212961 240 ntBASIC2.89□□□□□ -1.95
Col6a3E9PWQ3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms