Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Mir291a-201ENSMUST00000104815 82 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm12739-201ENSMUST00000119769 382 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm14810-201ENSMUST00000121628 486 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm12858-201ENSMUST00000121913 208 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm10357-201ENSMUST00000159886 264 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm8242-202ENSMUST00000193056 475 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm17951-201ENSMUST00000198536 496 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm45379-201ENSMUST00000211772 549 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.31□□□□□ -1.88
Use1Q9CQ56 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm14607-201ENSMUST00000119119 491 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm14687-201ENSMUST00000120206 363 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm22204-201ENSMUST00000122654 327 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm23716-201ENSMUST00000157348 144 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm24002-201ENSMUST00000158456 104 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm23112-201ENSMUST00000158606 125 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm28030-201ENSMUST00000184987 138 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm29524-201ENSMUST00000190819 699 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm45380-201ENSMUST00000210465 315 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Use1Q9CQ56 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Use1Q9CQ56 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.3□□□□□ -1.88
Use1Q9CQ56 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm23532-201ENSMUST00000104569 112 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm14253-201ENSMUST00000122112 639 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm15147-201ENSMUST00000122263 483 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm12998-201ENSMUST00000122445 789 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm23183-201ENSMUST00000122595 323 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm23205-201ENSMUST00000158671 103 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm6374-201ENSMUST00000159051 788 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm17117-201ENSMUST00000163665 299 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Use1Q9CQ56 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm27189-201ENSMUST00000184119 190 ntBASIC3.29□□□□□ -1.88
Use1Q9CQ56 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms