Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm3362-201ENSMUST00000148102 466 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm19193-201ENSMUST00000190263 590 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm37568-201ENSMUST00000191755 364 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm44059-201ENSMUST00000204048 351 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm45387-201ENSMUST00000209792 632 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm6303-201ENSMUST00000210123 471 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm18320-201ENSMUST00000211304 595 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm26263-201ENSMUST00000083281 164 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm11576-201ENSMUST00000117433 417 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm12149-201ENSMUST00000117511 654 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm14823-201ENSMUST00000117698 238 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm15297-201ENSMUST00000117795 290 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm14868-201ENSMUST00000117840 216 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm14852-201ENSMUST00000120065 647 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm23579-201ENSMUST00000158528 103 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm25284-201ENSMUST00000180345 141 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm42459-201ENSMUST00000199679 742 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm4714-201ENSMUST00000203395 279 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm9309-201ENSMUST00000223537 546 ntBASIC5.59□□□□□ -1.51
Clp1Q99LI9 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Clp1Q99LI9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clp1Q99LI9 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Clp1Q99LI9 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Clp1Q99LI9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Clp1Q99LI9 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.59□□□□□ -1.52
Clp1Q99LI9 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Clp1Q99LI9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.59□□□□□ -1.52
Clp1Q99LI9 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm25096-201ENSMUST00000104043 129 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm22769-201ENSMUST00000158367 98 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm23977-201ENSMUST00000177871 74 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm23679-201ENSMUST00000083161 119 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm22350-201ENSMUST00000083924 156 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clp1Q99LI9 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.58□□□□□ -1.52
Clp1Q99LI9 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clp1Q99LI9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms