Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm26201-201ENSMUST00000178047 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm24711-201ENSMUST00000178062 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm24609-201ENSMUST00000178166 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23265-201ENSMUST00000178321 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22812-201ENSMUST00000178329 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26246-201ENSMUST00000178388 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22131-201ENSMUST00000178415 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25155-201ENSMUST00000178450 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm24760-201ENSMUST00000178530 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26032-201ENSMUST00000178535 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22285-201ENSMUST00000178576 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22776-201ENSMUST00000178634 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22417-201ENSMUST00000178656 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26270-201ENSMUST00000178690 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25074-201ENSMUST00000178782 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25210-201ENSMUST00000178813 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25157-201ENSMUST00000178914 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23313-201ENSMUST00000178931 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23089-201ENSMUST00000178947 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22046-201ENSMUST00000179027 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26365-201ENSMUST00000179177 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23767-201ENSMUST00000179278 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm24153-201ENSMUST00000179280 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25597-201ENSMUST00000179388 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22941-201ENSMUST00000179630 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22631-201ENSMUST00000179656 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25816-201ENSMUST00000179764 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26188-201ENSMUST00000179963 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm25471-201ENSMUST00000180126 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm26433-201ENSMUST00000180227 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm23862-201ENSMUST00000180342 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm22128-201ENSMUST00000180346 94 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm27036-201ENSMUST00000182465 980 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm29281-201ENSMUST00000188077 381 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Mir142-201ENSMUST00000198092 64 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm42453-201ENSMUST00000200477 409 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm45474-201ENSMUST00000209471 408 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.33□□□□□ -1.56
Trim28Q62318 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim28Q62318 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim28Q62318 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim28Q62318 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim28Q62318 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Trim28Q62318 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Trim28Q62318 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm25943-201ENSMUST00000103791 90 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm22488-201ENSMUST00000116811 127 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm11512-201ENSMUST00000119669 663 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm23885-201ENSMUST00000122682 294 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm23365-201ENSMUST00000175019 125 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm25960-201ENSMUST00000175110 125 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm44453-201ENSMUST00000175161 126 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm25195-201ENSMUST00000177656 126 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm21737-201ENSMUST00000178112 664 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm20874-201ENSMUST00000178356 663 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm21744-201ENSMUST00000178403 662 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm25285-201ENSMUST00000178951 90 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm20901-201ENSMUST00000180177 664 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm27013-201ENSMUST00000182441 1024 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm6075-201ENSMUST00000186816 486 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm28090-201ENSMUST00000189458 664 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm21647-201ENSMUST00000189755 664 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim28Q62318 Gm45796-201ENSMUST00000212483 114 ntBASIC5.32□□□□□ -1.56
Trim28Q62318 Gm18557-201ENSMUST00000218710 433 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms