Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm28069-201ENSMUST00000189926 214 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm7726-201ENSMUST00000206241 231 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm18871-201ENSMUST00000218655 745 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm16419-201ENSMUST00000221057 625 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm24533-201ENSMUST00000083138 196 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm12125-201ENSMUST00000117261 736 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm15001-201ENSMUST00000117657 795 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm11625-201ENSMUST00000119535 296 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm14907-201ENSMUST00000121948 854 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm25295-201ENSMUST00000122794 306 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm23958-201ENSMUST00000157207 105 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm24553-201ENSMUST00000158653 131 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm42850-201ENSMUST00000202094 201 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm44084-201ENSMUST00000203947 409 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf3bQ3ULL6 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm14825-201ENSMUST00000113538 701 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm15988-201ENSMUST00000118677 367 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm13228-201ENSMUST00000118937 634 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm16331-201ENSMUST00000144274 498 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm6374-201ENSMUST00000159051 788 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm3851-201ENSMUST00000168653 318 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm37418-201ENSMUST00000195031 274 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm43295-201ENSMUST00000201439 412 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm32381-201ENSMUST00000203192 476 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm4528-201ENSMUST00000207905 551 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm4263-202ENSMUST00000221392 667 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 AF357341-201ENSMUST00000083088 75 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm10212-201ENSMUST00000087884 324 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf3bQ3ULL6 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm12515-201ENSMUST00000120116 361 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm25332-201ENSMUST00000158038 105 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm22532-201ENSMUST00000158822 140 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm28591-201ENSMUST00000185259 183 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm28141-201ENSMUST00000186676 342 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms