Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm7846-201ENSMUST00000145844 274 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm24553-201ENSMUST00000158653 131 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm8023-201ENSMUST00000195298 903 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm19620-201ENSMUST00000195972 434 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm3010-201ENSMUST00000198805 448 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm36247-201ENSMUST00000211834 285 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm5265-201ENSMUST00000076828 342 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Gm10237-201ENSMUST00000078393 273 ntBASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim43aQ3TL54 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm14163-201ENSMUST00000117342 217 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm15951-201ENSMUST00000118377 400 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm14975-201ENSMUST00000118741 664 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm22345-201ENSMUST00000122644 107 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm3160-201ENSMUST00000128343 607 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm23716-201ENSMUST00000157348 144 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm26988-201ENSMUST00000183296 945 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Mir6398-201ENSMUST00000184541 102 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm28877-201ENSMUST00000191349 604 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm43239-201ENSMUST00000200131 201 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm43227-201ENSMUST00000202239 677 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm43039-201ENSMUST00000202883 963 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm44092-201ENSMUST00000204470 258 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm45689-201ENSMUST00000210522 133 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm19219-201ENSMUST00000215863 724 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm18225-201ENSMUST00000216708 742 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm23455-201ENSMUST00000083331 100 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim43aQ3TL54 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Mir1198-201ENSMUST00000116995 121 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm12691-201ENSMUST00000120186 456 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm25667-201ENSMUST00000157701 275 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm26005-201ENSMUST00000158802 134 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Mir6238-201ENSMUST00000184140 129 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm28002-201ENSMUST00000184832 100 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm44355-201ENSMUST00000200417 104 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm45312-201ENSMUST00000210566 311 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm18585-201ENSMUST00000215197 556 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Gm17917-201ENSMUST00000218561 953 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Snord35b-201ENSMUST00000082833 87 ntBASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim43aQ3TL54 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Trim43aQ3TL54 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim43aQ3TL54 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms