Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.98□□□□□ -1.45
Col9a1Q05722 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm29774-201ENSMUST00000219270 436 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Mir302d-201ENSMUST00000083513 66 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col9a1Q05722 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.98□□□□□ -1.45
Col9a1Q05722 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col9a1Q05722 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Mir687-201ENSMUST00000102166 89 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm22276-201ENSMUST00000122469 129 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm26026-201ENSMUST00000122726 123 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm25665-201ENSMUST00000157695 110 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm23044-201ENSMUST00000157891 100 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm23312-201ENSMUST00000158774 102 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm22450-201ENSMUST00000179641 107 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Mir7087-201ENSMUST00000184840 70 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm17951-201ENSMUST00000198536 496 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm45215-201ENSMUST00000206407 395 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm26071-201ENSMUST00000083261 107 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm23455-201ENSMUST00000083331 100 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm24521-201ENSMUST00000083958 107 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col9a1Q05722 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.97□□□□□ -1.45
Col9a1Q05722 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col9a1Q05722 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col9a1Q05722 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col9a1Q05722 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col9a1Q05722 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.96□□□□□ -1.45
Col9a1Q05722 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col9a1Q05722 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm23472-201ENSMUST00000101806 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm15670-201ENSMUST00000117740 447 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm23959-201ENSMUST00000157208 324 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm24481-201ENSMUST00000157210 102 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm24005-201ENSMUST00000158459 296 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm22132-201ENSMUST00000175316 100 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm24497-201ENSMUST00000177868 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm25935-201ENSMUST00000178746 107 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm42694-201ENSMUST00000196951 358 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm43193-201ENSMUST00000197732 441 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm30674-201ENSMUST00000214523 392 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms