Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm10925-201ENSMUST00000189941 678 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm38201-201ENSMUST00000192143 387 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm42474-201ENSMUST00000201073 505 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm7468-201ENSMUST00000203900 652 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm45814-201ENSMUST00000212646 775 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm17917-201ENSMUST00000218561 953 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Gm46234-201ENSMUST00000218702 259 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdx1P18111 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm25592-201ENSMUST00000082635 131 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.09□□□□□ -1.91
Cdx1P18111 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.09□□□□□ -1.91
Cdx1P18111 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Cdx1P18111 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.09□□□□□ -1.92
Cdx1P18111 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Cdx1P18111 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cdx1P18111 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Cdx1P18111 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm23319-201ENSMUST00000104467 131 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm12173-201ENSMUST00000117622 273 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm13567-201ENSMUST00000118026 247 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.08□□□□□ -1.92
Cdx1P18111 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm26866-201ENSMUST00000180414 802 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm37575-201ENSMUST00000195467 309 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm45539-201ENSMUST00000210313 428 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm18704-201ENSMUST00000219736 446 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm19563-201ENSMUST00000222031 270 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Cdx1P18111 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Cdx1P18111 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm7381-201ENSMUST00000098958 300 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cdx1P18111 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Cdx1P18111 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Cdx1P18111 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.08□□□□□ -1.92
Cdx1P18111 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Cdx1P18111 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Cdx1P18111 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
Cdx1P18111 Gm25420-201ENSMUST00000104216 127 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm24281-201ENSMUST00000104234 136 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cdx1P18111 Gm11931-201ENSMUST00000121630 447 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm12103-201ENSMUST00000121892 362 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.07□□□□□ -1.92
Cdx1P18111 Gm15733-201ENSMUST00000132957 242 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm25748-201ENSMUST00000175487 70 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Mir5136-201ENSMUST00000175573 76 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm25412-201ENSMUST00000180258 107 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Mir7658-201ENSMUST00000184043 57 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm44274-201ENSMUST00000203417 256 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm19177-201ENSMUST00000204520 613 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cdx1P18111 Gm7751-201ENSMUST00000212868 709 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Cdx1P18111 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cdx1P18111 Mir34b-201ENSMUST00000083558 84 ntBASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cdx1P18111 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Cdx1P18111 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cdx1P18111 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm23431-201ENSMUST00000104006 107 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm26075-201ENSMUST00000104062 121 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm12252-201ENSMUST00000119517 219 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm11830-201ENSMUST00000120175 561 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm7350-201ENSMUST00000120964 636 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm15038-201ENSMUST00000122144 296 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm8200-201ENSMUST00000122390 222 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm25104-201ENSMUST00000122476 163 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms