Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm24689-201ENSMUST00000157760 104 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm23078-201ENSMUST00000157848 148 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm24940-201ENSMUST00000158326 108 ntBASIC5.54□□□□□ -1.52
RaraP11416 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Gm17062-201ENSMUST00000166987 461 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm24100-201ENSMUST00000178592 79 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm24137-201ENSMUST00000180055 79 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm24518-201ENSMUST00000180275 94 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm22391-201ENSMUST00000180356 79 ntBASIC5.54□□□□□ -1.52
RaraP11416 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.54□□□□□ -1.52
RaraP11416 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm29781-201ENSMUST00000203862 478 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm45422-201ENSMUST00000211476 246 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Gm19326-201ENSMUST00000219818 326 ntBASIC5.54□□□□□ -1.52
RaraP11416 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.54□□□□□ -1.52
RaraP11416 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.54□□□□□ -1.52
RaraP11416 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.54□□□□□ -1.52
RaraP11416 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.54□□□□□ -1.52
RaraP11416 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.54□□□□□ -1.52
RaraP11416 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Gm23459-201ENSMUST00000083259 131 ntBASIC5.54□□□□□ -1.52
RaraP11416 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.54□□□□□ -1.52
RaraP11416 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RaraP11416 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.54□□□□□ -1.52
RaraP11416 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RaraP11416 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
RaraP11416 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RaraP11416 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RaraP11416 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RaraP11416 Gm14142-201ENSMUST00000117833 296 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm12137-201ENSMUST00000119565 346 ntBASIC5.53□□□□□ -1.52
RaraP11416 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm15147-201ENSMUST00000122263 483 ntBASIC5.53□□□□□ -1.52
RaraP11416 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.53□□□□□ -1.52
RaraP11416 Gm5699-201ENSMUST00000152491 723 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm11507-201ENSMUST00000156462 412 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm23318-201ENSMUST00000158000 108 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm24295-201ENSMUST00000158298 131 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RaraP11416 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.53□□□□□ -1.52
RaraP11416 Mir3572-201ENSMUST00000175549 86 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm27854-201ENSMUST00000175578 244 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm23864-201ENSMUST00000177607 107 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm22633-201ENSMUST00000179834 107 ntBASIC5.53□□□□□ -1.52
RaraP11416 Mir7087-201ENSMUST00000184840 70 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.53□□□□□ -1.52
RaraP11416 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
RaraP11416 Gm9480-201ENSMUST00000198038 616 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm38670-201ENSMUST00000199248 77 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.53□□□□□ -1.52
RaraP11416 Gm45215-201ENSMUST00000206407 395 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm44609-201ENSMUST00000207157 460 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm45365-201ENSMUST00000209489 256 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm45730-201ENSMUST00000212560 395 ntBASIC5.53□□□□□ -1.52
RaraP11416 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 Gm9309-201ENSMUST00000223537 546 ntBASIC5.53□□□□□ -1.52
RaraP11416 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm26447-201ENSMUST00000082448 129 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm26225-201ENSMUST00000082508 135 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm26128-201ENSMUST00000083170 110 ntBASIC5.53□□□□□ -1.52
RaraP11416 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.53□□□□□ -1.52
RaraP11416 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.53□□□□□ -1.52
RaraP11416 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.53□□□□□ -1.52
RaraP11416 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RaraP11416 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.53□□□□□ -1.52
RaraP11416 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.53□□□□□ -1.52
RaraP11416 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.52□□□□□ -1.53
RaraP11416 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RaraP11416 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RaraP11416 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.52□□□□□ -1.53
RaraP11416 Gm7657-201ENSMUST00000118851 666 ntBASIC5.52□□□□□ -1.53
RaraP11416 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms