Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm25392-201ENSMUST00000157335 297 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm21999-201ENSMUST00000165985 387 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Gm9587-201ENSMUST00000172449 454 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Mir5118-201ENSMUST00000175551 67 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm18953-201ENSMUST00000175694 300 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm20574-201ENSMUST00000182867 917 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm28002-201ENSMUST00000184832 100 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Gm46234-201ENSMUST00000218702 259 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr192-201ENSMUST00000080251 925 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col1a1P11087 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col1a1P11087 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col1a1P11087 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col1a1P11087 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm13009-201ENSMUST00000121307 267 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm5392-201ENSMUST00000122189 789 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.49□□□□□ -1.85
Col1a1P11087 Gm23824-201ENSMUST00000158741 276 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm8392-201ENSMUST00000185647 835 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm28149-201ENSMUST00000187102 378 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm28768-201ENSMUST00000189034 378 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm19620-201ENSMUST00000195972 434 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm43368-201ENSMUST00000200638 409 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm43892-201ENSMUST00000204373 265 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm44623-201ENSMUST00000207934 434 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col1a1P11087 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.49□□□□□ -1.85
Col1a1P11087 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Col1a1P11087 Gm8074-201ENSMUST00000095071 252 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.49□□□□□ -1.85
Col1a1P11087 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col1a1P11087 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm26387-201ENSMUST00000104238 132 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Gm13717-201ENSMUST00000119868 365 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 DQ267100-201ENSMUST00000122600 72 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm25707-201ENSMUST00000175120 96 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Gm25528-201ENSMUST00000180264 132 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Mir7013-201ENSMUST00000183540 72 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm44157-201ENSMUST00000204720 410 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Gm20997-201ENSMUST00000205148 231 ntBASIC3.48□□□□□ -1.85
Col1a1P11087 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.48□□□□□ -1.85
Col1a1P11087 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col1a1P11087 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col1a1P11087 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col1a1P11087 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Col1a1P11087 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col1a1P11087 Gm24664-201ENSMUST00000158939 100 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col1a1P11087 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col1a1P11087 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col1a1P11087 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Col1a1P11087 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col1a1P11087 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col1a1P11087 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col1a1P11087 Gm23128-201ENSMUST00000104257 132 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col1a1P11087 Gm14821-201ENSMUST00000121975 435 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm24240-201ENSMUST00000157785 135 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm24922-201ENSMUST00000158511 102 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm17166-201ENSMUST00000172006 431 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm37353-201ENSMUST00000194497 313 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm23128-202ENSMUST00000196578 133 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col1a1P11087 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col1a1P11087 Gm45452-201ENSMUST00000210905 177 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.47□□□□□ -1.85
Col1a1P11087 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col1a1P11087 Mir184-201ENSMUST00000083662 69 ntBASIC3.47□□□□□ -1.85
Col1a1P11087 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms