Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm29196-201ENSMUST00000189239 618 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.46□□□□□ -1.7
Hoxd4P10628 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm43142-201ENSMUST00000198670 361 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.46□□□□□ -1.7
Hoxd4P10628 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.46□□□□□ -1.7
Hoxd4P10628 AC165092.3-201ENSMUST00000223602 282 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm7117-201ENSMUST00000071515 387 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm26330-201ENSMUST00000082817 104 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Gm25579-201ENSMUST00000083407 106 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Mir337-201ENSMUST00000083592 97 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Rny1-201ENSMUST00000083767 112 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd4P10628 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.46□□□□□ -1.7
Hoxd4P10628 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Hoxd4P10628 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd4P10628 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd4P10628 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd4P10628 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm25088-201ENSMUST00000101803 79 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm14652-201ENSMUST00000118479 235 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm14647-201ENSMUST00000119392 680 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm13232-201ENSMUST00000121816 632 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm25339-201ENSMUST00000157458 232 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Mir1970-201ENSMUST00000157839 104 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm25906-201ENSMUST00000158489 126 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm23581-201ENSMUST00000158531 63 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm22940-201ENSMUST00000158560 155 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm25048-201ENSMUST00000158598 91 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm18343-201ENSMUST00000172802 604 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm22859-201ENSMUST00000174978 122 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Mir6903-201ENSMUST00000183597 88 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm36984-201ENSMUST00000192770 235 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm18551-201ENSMUST00000195594 642 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm43405-201ENSMUST00000198642 337 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm19060-201ENSMUST00000201959 421 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm18194-201ENSMUST00000210455 481 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Gm22997-201ENSMUST00000082845 107 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.45□□□□□ -1.7
Hoxd4P10628 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd4P10628 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hoxd4P10628 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Gm23691-201ENSMUST00000101878 107 ntBASIC4.44□□□□□ -1.7
Hoxd4P10628 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd4P10628 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms