Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trav13d-3J3QMG8 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm26002-201ENSMUST00000101915 107 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Mir667-201ENSMUST00000102441 92 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm24855-201ENSMUST00000104848 97 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm12509-201ENSMUST00000118033 609 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm11268-201ENSMUST00000118347 267 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm14541-201ENSMUST00000118985 157 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm12994-201ENSMUST00000119601 447 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm24060-201ENSMUST00000157494 95 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm26320-201ENSMUST00000157742 306 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm22637-201ENSMUST00000158144 283 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm23385-201ENSMUST00000158592 295 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm22398-201ENSMUST00000174941 125 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm25731-201ENSMUST00000175167 125 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm27611-201ENSMUST00000184690 108 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm28924-201ENSMUST00000190012 241 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm43043-201ENSMUST00000196579 412 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm4644-201ENSMUST00000197587 400 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm5983-201ENSMUST00000197739 770 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm43407-201ENSMUST00000199816 317 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm44449-201ENSMUST00000203610 153 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm44135-201ENSMUST00000205221 368 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm45742-201ENSMUST00000212400 433 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm24622-201ENSMUST00000082619 162 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm23733-201ENSMUST00000083750 106 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.55□□□□□ -1.84
Trav13d-3J3QMG8 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm12044-201ENSMUST00000120335 213 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm24380-201ENSMUST00000122696 324 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm16250-201ENSMUST00000148974 256 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm22211-201ENSMUST00000158097 156 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm3102-201ENSMUST00000164236 489 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm17064-201ENSMUST00000167690 452 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Mir5134-201ENSMUST00000175529 78 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Mir7031-201ENSMUST00000183860 65 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm27733-201ENSMUST00000184803 68 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm18505-201ENSMUST00000187360 790 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm42451-201ENSMUST00000197410 244 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm43954-201ENSMUST00000204634 544 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms