Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Pcdh1F7BJK1 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm12806-201ENSMUST00000119384 268 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm12739-201ENSMUST00000119769 382 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm14980-201ENSMUST00000121247 736 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm23539-201ENSMUST00000157537 224 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm22596-201ENSMUST00000157601 316 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm24439-201ENSMUST00000157894 117 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm25714-201ENSMUST00000158626 296 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm16557-201ENSMUST00000159182 191 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm22290-201ENSMUST00000177655 107 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm22583-201ENSMUST00000178031 107 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm11395-201ENSMUST00000181011 499 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm11394-201ENSMUST00000181421 517 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm10048-201ENSMUST00000194196 372 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm5552-201ENSMUST00000197149 515 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm25139-201ENSMUST00000083247 210 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Pcdh1F7BJK1 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm14647-201ENSMUST00000119392 680 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm12872-201ENSMUST00000121835 320 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm23167-201ENSMUST00000157155 103 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm24499-201ENSMUST00000158446 104 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Mir6363-201ENSMUST00000184880 114 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Mir7674-201ENSMUST00000184964 63 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm28951-201ENSMUST00000190742 313 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm18964-201ENSMUST00000193013 563 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm19252-201ENSMUST00000204705 305 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm9202-201ENSMUST00000223036 437 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Mir338-201ENSMUST00000083666 98 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Olfr895-201ENSMUST00000093864 951 ntBASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Pcdh1F7BJK1 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms