Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm14903-201ENSMUST00000122435 537 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm22314-201ENSMUST00000158007 281 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm3111-201ENSMUST00000167426 490 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm27189-201ENSMUST00000184119 190 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Mir7j-201ENSMUST00000184427 122 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm27538-201ENSMUST00000185065 294 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm28390-201ENSMUST00000185212 700 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm42458-201ENSMUST00000201914 369 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm23447-201ENSMUST00000082798 163 ntBASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx2-4Q9EQM3 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Mir669l-201ENSMUST00000103771 98 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm6587-201ENSMUST00000120219 613 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14591-201ENSMUST00000120407 518 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm12358-201ENSMUST00000121842 520 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm12045-201ENSMUST00000122122 573 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm22840-201ENSMUST00000158444 136 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Mir7578-201ENSMUST00000183455 82 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm29668-201ENSMUST00000187802 315 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37727-201ENSMUST00000191637 819 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm17781-201ENSMUST00000195232 649 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm43070-201ENSMUST00000196938 415 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm43424-201ENSMUST00000200484 253 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm46146-201ENSMUST00000217483 346 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm4736-201ENSMUST00000100870 380 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm15268-201ENSMUST00000118845 352 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14887-201ENSMUST00000119522 663 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm11398-201ENSMUST00000120330 320 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm11260-201ENSMUST00000121163 942 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm26173-201ENSMUST00000158416 136 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm23379-201ENSMUST00000180026 107 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm11392-201ENSMUST00000181419 710 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms