Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm27940-201ENSMUST00000184449 98 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Trbv11-201ENSMUST00000194354 260 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm33973-201ENSMUST00000195148 534 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm2314-201ENSMUST00000200391 586 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm4045-201ENSMUST00000204076 310 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm45226-201ENSMUST00000206602 288 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm46146-201ENSMUST00000217483 346 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm9616-201ENSMUST00000221154 781 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm23510-201ENSMUST00000083083 163 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm24490-201ENSMUST00000083803 98 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm11898-201ENSMUST00000117161 385 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm6587-201ENSMUST00000120219 613 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm24675-201ENSMUST00000158757 259 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm18320-201ENSMUST00000211304 595 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Gm10042-201ENSMUST00000079884 78 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.97□□□□□ -1.61
Vps53Q8CCB4 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps53Q8CCB4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Vps53Q8CCB4 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.61
Vps53Q8CCB4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Vps53Q8CCB4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Vps53Q8CCB4 Gm23431-201ENSMUST00000104006 107 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm25876-201ENSMUST00000104329 119 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm12016-201ENSMUST00000119079 681 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm13785-201ENSMUST00000119099 690 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm6584-201ENSMUST00000119671 447 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm13751-201ENSMUST00000120280 752 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm12486-201ENSMUST00000120887 541 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm13973-201ENSMUST00000121371 894 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm7846-201ENSMUST00000145844 274 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm24224-201ENSMUST00000158828 258 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm27919-201ENSMUST00000185163 107 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm43586-201ENSMUST00000195948 310 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm43856-201ENSMUST00000197004 369 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm43708-201ENSMUST00000198857 961 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps53Q8CCB4 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms