Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22744-201ENSMUST00000083444 65 ntBASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim47Q8C0E3 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm14520-201ENSMUST00000119258 387 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm14926-201ENSMUST00000120650 508 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm22718-201ENSMUST00000122701 315 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm24295-201ENSMUST00000158298 131 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm22433-201ENSMUST00000158550 142 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm22857-201ENSMUST00000174969 134 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm28534-201ENSMUST00000187744 676 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm37503-201ENSMUST00000192088 319 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm38053-201ENSMUST00000193938 160 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Mir6994-201ENSMUST00000198985 73 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm42579-201ENSMUST00000200512 734 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm45119-201ENSMUST00000207612 199 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm6988-201ENSMUST00000222676 375 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 AL662807.1-201ENSMUST00000224183 126 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 AC165138.1-201ENSMUST00000226984 270 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.03□□□□□ -1.44
Trim47Q8C0E3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim47Q8C0E3 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.02□□□□□ -1.44
Trim47Q8C0E3 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Trim47Q8C0E3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm24789-201ENSMUST00000104282 131 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm13755-201ENSMUST00000118509 305 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm11975-201ENSMUST00000118772 481 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm14601-201ENSMUST00000120892 236 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm11677-201ENSMUST00000121349 977 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Mir7687-201ENSMUST00000184722 59 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm45207-201ENSMUST00000207469 145 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm46993-201ENSMUST00000220708 259 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Gm12080-201ENSMUST00000119821 1883 ntBASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim47Q8C0E3 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm15844-201ENSMUST00000118016 576 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm13887-201ENSMUST00000119009 344 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm13488-201ENSMUST00000120419 179 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm13932-201ENSMUST00000120873 610 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm11894-201ENSMUST00000121579 328 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm15213-201ENSMUST00000122098 216 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms