Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm20574-201ENSMUST00000182867 917 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm27535-201ENSMUST00000183814 157 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm27648-201ENSMUST00000184315 107 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm38356-201ENSMUST00000194313 408 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm45513-201ENSMUST00000210228 376 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Gm16419-201ENSMUST00000221057 625 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm22939-201ENSMUST00000103958 131 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm12268-201ENSMUST00000118398 442 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm14119-201ENSMUST00000119511 235 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm12739-201ENSMUST00000119769 382 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm11387-201ENSMUST00000120266 772 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm26027-201ENSMUST00000122725 268 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm24914-201ENSMUST00000157285 313 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm20651-201ENSMUST00000177219 329 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm27160-201ENSMUST00000184837 199 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm37293-201ENSMUST00000191658 295 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm43601-201ENSMUST00000196294 945 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm17917-201ENSMUST00000218561 953 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.59□□□□□ -1.99
Trav6d-4Q5R1I0 Gm38260-201ENSMUST00000193573 3995 ntBASIC2.59□□□□□ -2
Trav6d-4Q5R1I0 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trav6d-4Q5R1I0 Gm37983-201ENSMUST00000193207 2006 ntBASIC2.59□□□□□ -2
Trav6d-4Q5R1I0 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trav6d-4Q5R1I0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Trav6d-4Q5R1I0 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm13504-201ENSMUST00000117490 316 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm12723-201ENSMUST00000120700 451 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm6374-201ENSMUST00000159051 788 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm6486-201ENSMUST00000166202 434 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm20542-201ENSMUST00000174582 372 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm18520-201ENSMUST00000174783 658 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm22108-201ENSMUST00000177961 106 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm24798-201ENSMUST00000179334 106 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm26933-201ENSMUST00000182320 827 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm27249-201ENSMUST00000185049 328 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm29747-201ENSMUST00000194764 585 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm43214-201ENSMUST00000199242 352 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm43930-201ENSMUST00000203868 845 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 AC163621.2-201ENSMUST00000222229 682 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm26121-201ENSMUST00000083364 162 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.58□□□□□ -2
Trav6d-4Q5R1I0 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm14901-201ENSMUST00000119001 283 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm9043-201ENSMUST00000119677 314 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm24787-201ENSMUST00000157380 123 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 Gm25606-201ENSMUST00000158363 95 ntBASIC2.57□□□□□ -2
Trav6d-4Q5R1I0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms