Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3bQ3ULL6 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm12982-201ENSMUST00000117408 190 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm11905-201ENSMUST00000117653 678 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm12276-201ENSMUST00000121709 301 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm24289-201ENSMUST00000157629 135 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm3123-201ENSMUST00000163480 480 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm24819-201ENSMUST00000175094 166 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm26933-201ENSMUST00000182320 827 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm37193-201ENSMUST00000193087 513 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm7530-201ENSMUST00000218466 605 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm5185-201ENSMUST00000080271 619 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.56□□□□□ -1.84
Upf3bQ3ULL6 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm13064-201ENSMUST00000119125 557 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm15799-201ENSMUST00000120899 289 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm15142-201ENSMUST00000121013 856 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm26988-201ENSMUST00000183296 945 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Mir6393-201ENSMUST00000183709 94 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Mir6914-201ENSMUST00000184999 69 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm43415-201ENSMUST00000201934 750 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm45574-201ENSMUST00000210921 331 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm45814-201ENSMUST00000212646 775 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.55□□□□□ -1.84
Upf3bQ3ULL6 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm14622-201ENSMUST00000117117 468 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm12568-201ENSMUST00000117362 624 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm13379-201ENSMUST00000118053 621 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm10075-201ENSMUST00000162030 545 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm20542-201ENSMUST00000174582 372 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Gm18486-201ENSMUST00000184040 298 ntBASIC3.54□□□□□ -1.84
Upf3bQ3ULL6 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms