Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm22834-201ENSMUST00000102021 79 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm14628-201ENSMUST00000117508 635 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm13085-201ENSMUST00000118356 171 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.57□□□□□ -1.52
Col6a1Q04857 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm25671-201ENSMUST00000178612 105 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm23307-201ENSMUST00000179167 105 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm25286-201ENSMUST00000179790 105 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm21856-201ENSMUST00000187547 696 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm29196-201ENSMUST00000189239 618 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm28098-201ENSMUST00000191361 699 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm43144-201ENSMUST00000198256 485 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Mir466e-201ENSMUST00000198862 84 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm45023-201ENSMUST00000207951 379 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm18488-201ENSMUST00000215082 364 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Snord42a-201ENSMUST00000082606 65 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm25401-201ENSMUST00000082975 106 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm23875-201ENSMUST00000083711 318 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm15772-201ENSMUST00000118533 438 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm13510-201ENSMUST00000118659 429 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm13082-201ENSMUST00000118877 561 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm7363-201ENSMUST00000119883 399 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm11584-201ENSMUST00000120636 325 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm14736-201ENSMUST00000121470 336 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm23538-201ENSMUST00000157535 101 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm3470-201ENSMUST00000160819 420 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm4842-201ENSMUST00000183237 835 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm10105-201ENSMUST00000184601 270 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Mir3620-201ENSMUST00000184710 61 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm9134-201ENSMUST00000193186 551 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Olfr881-201ENSMUST00000074611 948 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a1Q04857 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a1Q04857 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.56□□□□□ -1.52
Col6a1Q04857 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col6a1Q04857 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col6a1Q04857 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm14761-201ENSMUST00000121363 262 ntBASIC5.55□□□□□ -1.52
Col6a1Q04857 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms