Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SgcbP82349 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.88□□□□□ -1.63
SgcbP82349 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.88□□□□□ -1.63
SgcbP82349 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SgcbP82349 Gm26225-201ENSMUST00000082508 135 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Mir331-201ENSMUST00000083673 96 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SgcbP82349 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SgcbP82349 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SgcbP82349 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SgcbP82349 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.88□□□□□ -1.63
SgcbP82349 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SgcbP82349 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SgcbP82349 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.87□□□□□ -1.63
SgcbP82349 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Mir667-201ENSMUST00000102441 92 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm13681-201ENSMUST00000117925 210 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm2066-201ENSMUST00000118046 389 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm11774-201ENSMUST00000118601 293 ntBASIC4.87□□□□□ -1.63
SgcbP82349 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm23258-201ENSMUST00000158319 106 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm27148-201ENSMUST00000185086 160 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm37128-201ENSMUST00000192599 232 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm44475-201ENSMUST00000204041 424 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm35876-201ENSMUST00000205044 459 ntBASIC4.87□□□□□ -1.63
SgcbP82349 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm6056-201ENSMUST00000221253 488 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm9269-201ENSMUST00000221661 578 ntBASIC4.87□□□□□ -1.63
SgcbP82349 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.87□□□□□ -1.63
SgcbP82349 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SgcbP82349 Gm22807-201ENSMUST00000082737 129 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SgcbP82349 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SgcbP82349 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SgcbP82349 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.87□□□□□ -1.63
SgcbP82349 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SgcbP82349 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC4.87□□□□□ -1.63
SgcbP82349 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SgcbP82349 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SgcbP82349 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SgcbP82349 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
SgcbP82349 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SgcbP82349 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Mir147-201ENSMUST00000102354 79 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SgcbP82349 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm15215-201ENSMUST00000117773 489 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm12156-201ENSMUST00000119188 554 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm14520-201ENSMUST00000119258 387 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm14269-201ENSMUST00000120455 306 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm11369-201ENSMUST00000120812 318 ntBASIC4.86□□□□□ -1.63
SgcbP82349 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SgcbP82349 Gm23262-201ENSMUST00000158323 168 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm22529-201ENSMUST00000158817 123 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm3191-201ENSMUST00000167139 346 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Mir5112-201ENSMUST00000174897 60 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm21991-201ENSMUST00000180006 508 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Mir6417-201ENSMUST00000183815 116 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm2914-201ENSMUST00000186120 328 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm36934-201ENSMUST00000192007 306 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm37692-201ENSMUST00000192633 232 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm6543-201ENSMUST00000197353 808 ntBASIC4.86□□□□□ -1.63
SgcbP82349 Gm42672-201ENSMUST00000197821 352 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms