Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23268-201ENSMUST00000175494 78 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm7258-201ENSMUST00000179317 300 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col1a1P11087 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col1a1P11087 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm22782-201ENSMUST00000104082 132 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm16218-201ENSMUST00000155424 388 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm24930-201ENSMUST00000158315 83 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Mir5123-201ENSMUST00000177794 83 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm25360-201ENSMUST00000178786 191 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.54□□□□□ -1.84
Col1a1P11087 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.54□□□□□ -1.84
Col1a1P11087 Gm8242-202ENSMUST00000193056 475 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.54□□□□□ -1.84
Col1a1P11087 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.54□□□□□ -1.84
Col1a1P11087 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Gm45317-201ENSMUST00000210385 223 ntBASIC3.54□□□□□ -1.84
Col1a1P11087 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
Col1a1P11087 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col1a1P11087 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col1a1P11087 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col1a1P11087 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Col1a1P11087 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col1a1P11087 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col1a1P11087 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col1a1P11087 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col1a1P11087 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col1a1P11087 Gm14333-201ENSMUST00000130484 264 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.53□□□□□ -1.84
Col1a1P11087 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col1a1P11087 Gm3370-201ENSMUST00000171785 500 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm19203-201ENSMUST00000174049 939 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col1a1P11087 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col1a1P11087 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.53□□□□□ -1.84
Col1a1P11087 Gm28781-201ENSMUST00000185760 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm29574-201ENSMUST00000186226 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col1a1P11087 Gm28828-201ENSMUST00000186601 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm29307-201ENSMUST00000187367 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm28896-201ENSMUST00000188609 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm29339-201ENSMUST00000189613 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm28159-201ENSMUST00000190296 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm29407-201ENSMUST00000191468 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm38107-201ENSMUST00000194873 696 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm8747-201ENSMUST00000195392 751 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Gm42581-201ENSMUST00000201774 966 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col1a1P11087 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.53□□□□□ -1.84
Col1a1P11087 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Col1a1P11087 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm25485-201ENSMUST00000104120 132 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC3.52□□□□□ -1.85
Col1a1P11087 Gm25153-201ENSMUST00000157118 156 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm22664-201ENSMUST00000158719 105 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm24681-201ENSMUST00000158760 107 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm24816-201ENSMUST00000175311 151 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Gm4761-201ENSMUST00000178086 582 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.52□□□□□ -1.85
Col1a1P11087 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.52□□□□□ -1.85
Col1a1P11087 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col1a1P11087 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col1a1P11087 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col1a1P11087 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col1a1P11087 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.51□□□□□ -1.85
Col1a1P11087 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col1a1P11087 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.51□□□□□ -1.85
Col1a1P11087 Gm24213-201ENSMUST00000158255 258 ntBASIC3.51□□□□□ -1.85
Col1a1P11087 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Col1a1P11087 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col1a1P11087 Gm6230-201ENSMUST00000208077 780 ntBASIC3.51□□□□□ -1.85
Col1a1P11087 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col1a1P11087 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col1a1P11087 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.5□□□□□ -1.85
Col1a1P11087 Gm7327-201ENSMUST00000120925 652 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms