Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col5a1O88207 Mir344c-201ENSMUST00000103919 92 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.91□□□□□ -1.94
Col5a1O88207 Gm22666-201ENSMUST00000158717 164 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm17421-201ENSMUST00000167845 674 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm18698-201ENSMUST00000192327 668 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm5917-201ENSMUST00000217638 721 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col5a1O88207 Gm23136-201ENSMUST00000083425 99 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Col5a1O88207 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col5a1O88207 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col5a1O88207 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col5a1O88207 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Col5a1O88207 AC159476.1-201ENSMUST00000215914 1668 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col5a1O88207 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col5a1O88207 Gm12568-201ENSMUST00000117362 624 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm13379-201ENSMUST00000118053 621 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm12788-201ENSMUST00000119090 308 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm15103-201ENSMUST00000119893 871 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm12222-201ENSMUST00000121368 260 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm25270-201ENSMUST00000122606 138 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm21990-201ENSMUST00000124692 383 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm24720-201ENSMUST00000157518 166 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm10075-201ENSMUST00000162030 545 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Mir3473a-201ENSMUST00000175011 78 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col5a1O88207 Gm38075-201ENSMUST00000191979 920 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm4859-201ENSMUST00000199625 787 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm6064-201ENSMUST00000203999 454 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 Gm19126-201ENSMUST00000207896 509 ntBASIC2.91□□□□□ -1.94
Col5a1O88207 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC2.91□□□□□ -1.94
Col5a1O88207 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col5a1O88207 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col5a1O88207 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col5a1O88207 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.91□□□□□ -1.94
Col5a1O88207 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Col5a1O88207 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col5a1O88207 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
Col5a1O88207 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.9□□□□□ -1.94
Col5a1O88207 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Col5a1O88207 Gm43259-201ENSMUST00000198446 3277 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm13167-201ENSMUST00000118554 578 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm11363-201ENSMUST00000121672 548 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm22227-201ENSMUST00000157356 259 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Mir3075-201ENSMUST00000175340 85 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Gm20574-201ENSMUST00000182867 917 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm18486-201ENSMUST00000184040 298 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm28871-201ENSMUST00000186191 687 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm18692-201ENSMUST00000193047 511 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC2.9□□□□□ -1.95
Col5a1O88207 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col5a1O88207 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.9□□□□□ -1.95
Col5a1O88207 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.9□□□□□ -1.95
Col5a1O88207 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Col5a1O88207 Gm11229-201ENSMUST00000121993 437 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.89□□□□□ -1.95
Col5a1O88207 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm43894-201ENSMUST00000203274 688 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC2.89□□□□□ -1.95
Col5a1O88207 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Col5a1O88207 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col5a1O88207 Gm23011-201ENSMUST00000104148 132 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 Gm13532-201ENSMUST00000120373 240 ntBASIC2.89□□□□□ -1.95
Col5a1O88207 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col5a1O88207 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms