Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Gm18855-201ENSMUST00000206689 570 ntBASIC3.34□□□□□ -1.87
ClockO08785 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.34□□□□□ -1.87
ClockO08785 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.34□□□□□ -1.87
ClockO08785 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.34□□□□□ -1.87
ClockO08785 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ClockO08785 Gm5548-201ENSMUST00000055878 397 ntBASIC3.34□□□□□ -1.87
ClockO08785 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ClockO08785 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ClockO08785 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ClockO08785 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
ClockO08785 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ClockO08785 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.33□□□□□ -1.88
ClockO08785 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ClockO08785 Snord66-201ENSMUST00000104051 75 ntBASIC3.33□□□□□ -1.88
ClockO08785 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm14795-201ENSMUST00000118461 471 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm15244-201ENSMUST00000121122 130 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm15116-201ENSMUST00000122248 663 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm24875-201ENSMUST00000158888 104 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm16569-201ENSMUST00000160526 314 ntBASIC3.33□□□□□ -1.88
ClockO08785 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.33□□□□□ -1.88
ClockO08785 Mir1251-201ENSMUST00000175486 84 ntBASIC3.33□□□□□ -1.88
ClockO08785 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Gm22111-201ENSMUST00000178010 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm23687-201ENSMUST00000178664 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm25944-201ENSMUST00000178758 94 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm24566-201ENSMUST00000179286 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm23305-201ENSMUST00000179342 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Gm26389-201ENSMUST00000179819 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm22130-201ENSMUST00000179979 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Gm22393-201ENSMUST00000180153 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm25085-201ENSMUST00000180298 79 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.33□□□□□ -1.88
ClockO08785 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.33□□□□□ -1.88
ClockO08785 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28141-201ENSMUST00000186676 342 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm29524-201ENSMUST00000190819 699 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm36934-201ENSMUST00000192007 306 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm9379-201ENSMUST00000196790 646 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm17937-201ENSMUST00000197908 742 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm44294-201ENSMUST00000205090 728 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm44852-201ENSMUST00000207950 369 ntBASIC3.33□□□□□ -1.88
ClockO08785 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.33□□□□□ -1.88
ClockO08785 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
ClockO08785 Gm45778-201ENSMUST00000211959 153 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm18388-201ENSMUST00000222339 557 ntBASIC3.33□□□□□ -1.88
ClockO08785 Gm19786-201ENSMUST00000222589 580 ntBASIC3.33□□□□□ -1.88
ClockO08785 LOC667541-201ENSMUST00000223408 278 ntBASIC3.33□□□□□ -1.88
ClockO08785 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Gm7099-201ENSMUST00000080066 554 ntBASIC3.33□□□□□ -1.88
ClockO08785 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
ClockO08785 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ClockO08785 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.33□□□□□ -1.88
ClockO08785 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ClockO08785 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.33□□□□□ -1.88
ClockO08785 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ClockO08785 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ClockO08785 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ClockO08785 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ClockO08785 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ClockO08785 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
ClockO08785 Gm22493-201ENSMUST00000104494 132 ntBASIC3.32□□□□□ -1.88
ClockO08785 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ClockO08785 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.32□□□□□ -1.88
ClockO08785 Gm11869-201ENSMUST00000118701 329 ntBASIC3.32□□□□□ -1.88
ClockO08785 Gm12495-201ENSMUST00000119750 447 ntBASIC3.32□□□□□ -1.88
ClockO08785 Gm12691-201ENSMUST00000120186 456 ntBASIC3.32□□□□□ -1.88
ClockO08785 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ClockO08785 Gm11982-201ENSMUST00000121480 314 ntBASIC3.32□□□□□ -1.88
ClockO08785 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms