Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 AC080021.1-201ENSMUST00000228104 700 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm10025-201ENSMUST00000079568 372 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm37488-201ENSMUST00000195434 3374 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm12954-201ENSMUST00000118610 611 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm9208-201ENSMUST00000120468 948 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm13459-201ENSMUST00000121558 646 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm20651-201ENSMUST00000177219 329 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm25360-201ENSMUST00000178786 191 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm29524-201ENSMUST00000190819 699 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 AC158641.1-201ENSMUST00000218933 229 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm23302-201ENSMUST00000082710 100 ntBASIC2.35□□□□□ -2.03
Col6a5A6H584 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.35□□□□□ -2.03
Col6a5A6H584 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm25938-201ENSMUST00000104139 166 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm13555-201ENSMUST00000121668 319 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm27959-201ENSMUST00000185172 111 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm9377-201ENSMUST00000207227 623 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm34005-201ENSMUST00000215834 282 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm26494-201ENSMUST00000083154 143 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Gm24493-201ENSMUST00000083805 143 ntBASIC2.34□□□□□ -2.03
Col6a5A6H584 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a5A6H584 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col6a5A6H584 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Col6a5A6H584 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm22730-201ENSMUST00000158085 171 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm24879-201ENSMUST00000158386 143 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm16236-201ENSMUST00000159588 379 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm15795-201ENSMUST00000160969 553 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm28466-201ENSMUST00000190678 659 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm19154-201ENSMUST00000223330 940 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm25755-201ENSMUST00000083396 107 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Gm43526-201ENSMUST00000196666 1565 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col6a5A6H584 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC2.34□□□□□ -2.04
Col6a5A6H584 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm13433-201ENSMUST00000121701 240 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm24601-201ENSMUST00000157970 143 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm24949-201ENSMUST00000183609 215 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm19366-201ENSMUST00000206996 156 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 AC133283.1-201ENSMUST00000228443 859 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm16383-201ENSMUST00000118122 232 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm38283-201ENSMUST00000193041 695 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col6a5A6H584 AC118230.1-201ENSMUST00000220196 656 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm8074-201ENSMUST00000095071 252 ntBASIC2.33□□□□□ -2.04
Col6a5A6H584 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.33□□□□□ -2.04
Col6a5A6H584 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm24914-201ENSMUST00000157285 313 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm24436-201ENSMUST00000157889 302 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm24075-201ENSMUST00000158175 72 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Mir3058-201ENSMUST00000175126 91 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm28625-201ENSMUST00000188309 205 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 AC155830.1-201ENSMUST00000220050 3836 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Mir200b-201ENSMUST00000083615 70 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms