Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm38076-201ENSMUST00000193889 450 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Mir6516-201ENSMUST00000196236 110 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm44336-201ENSMUST00000203696 468 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm44853-201ENSMUST00000209070 250 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm23459-201ENSMUST00000083259 131 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm22577-201ENSMUST00000083731 109 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Olfr713-201ENSMUST00000098139 975 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Prpf40aQ9R1C7 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm22370-201ENSMUST00000102422 83 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm12693-201ENSMUST00000121965 483 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm12226-201ENSMUST00000144172 876 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm24477-201ENSMUST00000157438 103 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm25363-201ENSMUST00000158850 245 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm22448-201ENSMUST00000179254 107 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm27233-201ENSMUST00000184030 307 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Mir6412-201ENSMUST00000184477 97 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm28654-201ENSMUST00000189801 379 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm28552-201ENSMUST00000190725 388 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm9317-201ENSMUST00000197055 862 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm44016-201ENSMUST00000203463 164 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm45395-201ENSMUST00000209891 559 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm4012-201ENSMUST00000221504 581 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Rny1-201ENSMUST00000083767 112 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Gm5670-201ENSMUST00000093546 372 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Prpf40aQ9R1C7 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm22592-201ENSMUST00000104242 131 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm12303-201ENSMUST00000119506 673 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm27579-201ENSMUST00000158113 63 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm23225-201ENSMUST00000158121 114 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm25362-201ENSMUST00000158854 105 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm26622-201ENSMUST00000180520 298 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm27754-201ENSMUST00000183340 126 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm27781-201ENSMUST00000185185 92 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm5058-201ENSMUST00000187331 463 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm35648-201ENSMUST00000202304 475 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm45200-201ENSMUST00000207434 919 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm45119-201ENSMUST00000207612 199 ntBASIC5.94□□□□□ -1.46
Prpf40aQ9R1C7 Gm8672-201ENSMUST00000221200 332 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms