Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Upk3aQ9JKX8 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upk3aQ9JKX8 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upk3aQ9JKX8 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.41□□□□□ -1.86
Upk3aQ9JKX8 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.4□□□□□ -1.86
Upk3aQ9JKX8 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Upk3aQ9JKX8 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Upk3aQ9JKX8 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm9157-201ENSMUST00000117673 225 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm15060-201ENSMUST00000119550 948 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm13737-201ENSMUST00000119793 232 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm13080-201ENSMUST00000120556 420 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm3835-201ENSMUST00000120752 403 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm7350-201ENSMUST00000120964 636 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm12755-201ENSMUST00000122297 282 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm22367-201ENSMUST00000178930 132 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm18505-201ENSMUST00000187360 790 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm6064-201ENSMUST00000203999 454 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm20039-201ENSMUST00000210329 394 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm23736-201ENSMUST00000082553 75 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 BC051076-202ENSMUST00000199477 2868 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upk3aQ9JKX8 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm24581-201ENSMUST00000103962 133 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm6797-201ENSMUST00000119440 512 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm12998-201ENSMUST00000122445 789 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm16359-201ENSMUST00000124511 289 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm23755-201ENSMUST00000157578 343 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm22501-201ENSMUST00000158981 127 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm16026-202ENSMUST00000159695 772 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm17030-201ENSMUST00000167016 393 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm18604-201ENSMUST00000172535 558 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm26141-201ENSMUST00000175299 126 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm18855-201ENSMUST00000206689 570 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm7639-201ENSMUST00000212608 484 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm7540-201ENSMUST00000219764 926 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm8785-201ENSMUST00000220259 487 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upk3aQ9JKX8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upk3aQ9JKX8 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms