Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm12099-201ENSMUST00000118660 750 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm15493-201ENSMUST00000119461 528 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm14831-201ENSMUST00000120253 409 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm24914-201ENSMUST00000157285 313 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm24060-201ENSMUST00000157494 95 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm23279-201ENSMUST00000157912 97 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm22655-201ENSMUST00000174949 96 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm26400-201ENSMUST00000175012 85 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm22650-201ENSMUST00000175138 105 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm26970-201ENSMUST00000182990 964 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm9022-202ENSMUST00000183285 483 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Mir7046-201ENSMUST00000183435 66 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Mir6355-201ENSMUST00000183687 106 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm44811-201ENSMUST00000209120 228 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm23455-201ENSMUST00000083331 100 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim39Q9ESN2 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm22499-201ENSMUST00000104501 135 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm14706-201ENSMUST00000117744 255 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm11852-201ENSMUST00000120806 222 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm25439-201ENSMUST00000158280 131 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm22160-201ENSMUST00000158405 328 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm23725-201ENSMUST00000177876 107 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Mir6952-201ENSMUST00000185092 61 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm44016-201ENSMUST00000203463 164 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm5612-201ENSMUST00000053326 375 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm23721-201ENSMUST00000083005 107 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm24316-201ENSMUST00000083041 107 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Olfr467-201ENSMUST00000084756 927 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Trim39Q9ESN2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim39Q9ESN2 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms