Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm25853-201ENSMUST00000082793 132 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm22482-201ENSMUST00000122563 359 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm23206-201ENSMUST00000122720 184 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm25365-201ENSMUST00000158852 121 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm27602-201ENSMUST00000183861 111 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm43739-201ENSMUST00000198294 307 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm44063-201ENSMUST00000203307 376 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm29754-201ENSMUST00000206269 358 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm46389-201ENSMUST00000223199 392 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm26330-201ENSMUST00000082817 104 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Olfr203-201ENSMUST00000089305 924 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm16261-201ENSMUST00000096813 205 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim11Q99PQ2 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm23750-201ENSMUST00000104222 132 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm23910-201ENSMUST00000104597 132 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm12782-201ENSMUST00000117519 727 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm8061-201ENSMUST00000122380 350 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm22381-201ENSMUST00000158186 107 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm26404-201ENSMUST00000158498 109 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm27960-201ENSMUST00000183445 184 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm18403-201ENSMUST00000192907 529 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm29813-201ENSMUST00000195856 447 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm44083-201ENSMUST00000203114 337 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm18850-201ENSMUST00000211578 388 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm45710-201ENSMUST00000212847 215 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm24622-201ENSMUST00000082619 162 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Snord59a-201ENSMUST00000082844 74 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm24610-201ENSMUST00000083270 109 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm6043-201ENSMUST00000099961 492 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim11Q99PQ2 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim11Q99PQ2 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms