Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm26384-201ENSMUST00000102183 110 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm6893-201ENSMUST00000118385 522 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm15553-201ENSMUST00000118757 430 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm12006-201ENSMUST00000120786 403 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm3111-201ENSMUST00000167426 490 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm20673-201ENSMUST00000177167 430 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm29413-201ENSMUST00000186019 880 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm29639-201ENSMUST00000188375 580 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm42830-201ENSMUST00000196642 313 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm9236-201ENSMUST00000196892 587 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm43367-201ENSMUST00000199986 625 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm43232-201ENSMUST00000201346 364 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 AC069561.2-201ENSMUST00000217596 420 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 AC153526.4-201ENSMUST00000217713 379 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 AC121960.3-201ENSMUST00000227077 623 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm25586-201ENSMUST00000082499 112 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps53Q8CCB4 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps53Q8CCB4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 Gm42483-201ENSMUST00000197556 1742 ntBASIC5□□□□□ -1.61
Vps53Q8CCB4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps53Q8CCB4 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps53Q8CCB4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm13728-201ENSMUST00000117471 400 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm6568-201ENSMUST00000122274 697 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm17177-201ENSMUST00000169144 483 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm27896-201ENSMUST00000175162 317 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm26219-201ENSMUST00000175216 71 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm27036-201ENSMUST00000182465 980 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm30280-201ENSMUST00000192214 262 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm38270-201ENSMUST00000192721 407 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm44521-201ENSMUST00000206469 217 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm44543-201ENSMUST00000209136 396 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Gm45727-201ENSMUST00000212886 572 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Vps53Q8CCB4 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm22269-201ENSMUST00000104002 130 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm26367-201ENSMUST00000104165 132 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm23987-201ENSMUST00000117039 129 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm15312-201ENSMUST00000118827 271 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm15309-201ENSMUST00000121644 240 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm25966-201ENSMUST00000157169 117 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm23743-201ENSMUST00000157389 274 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Gm26173-201ENSMUST00000158416 136 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.98□□□□□ -1.61
Vps53Q8CCB4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps53Q8CCB4 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms