Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm43304-201ENSMUST00000196803 326 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm45530-201ENSMUST00000211658 225 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm23455-201ENSMUST00000083331 100 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Mir370-201ENSMUST00000083499 79 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Krt40Q6IFX3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Mir92b-201ENSMUST00000102300 83 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm26320-201ENSMUST00000157742 306 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm17155-201ENSMUST00000165969 473 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm27163-201ENSMUST00000184767 409 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm38395-201ENSMUST00000199904 830 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm2314-201ENSMUST00000200391 586 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm45367-201ENSMUST00000210171 347 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.79□□□□□ -1.64
Krt40Q6IFX3 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm14107-201ENSMUST00000117774 330 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm14517-201ENSMUST00000119040 337 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm12044-201ENSMUST00000120335 213 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm14881-201ENSMUST00000120366 372 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm14591-201ENSMUST00000120407 518 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm11645-201ENSMUST00000121589 649 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm2862-201ENSMUST00000161524 328 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm19203-201ENSMUST00000174049 939 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm31123-201ENSMUST00000192094 666 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.78□□□□□ -1.64
Krt40Q6IFX3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.78□□□□□ -1.64
Krt40Q6IFX3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms