Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
Cln3Q61124 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Cln3Q61124 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm24578-201ENSMUST00000103970 129 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm25418-201ENSMUST00000104214 129 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm16128-201ENSMUST00000117855 626 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm3267-201ENSMUST00000118671 473 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm15553-201ENSMUST00000118757 430 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm12785-201ENSMUST00000122052 172 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.94□□□□□ -1.46
Cln3Q61124 Gm26278-201ENSMUST00000157098 132 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm26310-201ENSMUST00000157766 117 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm22435-201ENSMUST00000158552 128 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.94□□□□□ -1.46
Cln3Q61124 Gm27928-201ENSMUST00000183747 256 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm35931-201ENSMUST00000203931 448 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm44938-201ENSMUST00000208614 427 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.94□□□□□ -1.46
Cln3Q61124 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.94□□□□□ -1.46
Cln3Q61124 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm22456-201ENSMUST00000082578 125 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm22741-201ENSMUST00000083438 165 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cln3Q61124 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.94□□□□□ -1.46
Cln3Q61124 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Cln3Q61124 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.93□□□□□ -1.46
Cln3Q61124 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm22676-201ENSMUST00000116972 129 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm12285-201ENSMUST00000117347 233 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm11366-201ENSMUST00000119279 429 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm13677-201ENSMUST00000120739 595 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm6081-201ENSMUST00000134472 489 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm25555-201ENSMUST00000158078 111 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm24001-201ENSMUST00000158463 85 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm8114-201ENSMUST00000172225 484 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm23725-201ENSMUST00000177876 107 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cln3Q61124 Mir7031-201ENSMUST00000183860 65 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm44016-201ENSMUST00000203463 164 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm44259-201ENSMUST00000204996 298 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm45032-201ENSMUST00000205375 520 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm45156-201ENSMUST00000207255 439 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm45879-201ENSMUST00000212521 392 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.93□□□□□ -1.46
Cln3Q61124 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm33654-201ENSMUST00000221704 215 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm23645-201ENSMUST00000083228 108 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Gm10540-201ENSMUST00000097581 276 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Cln3Q61124 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cln3Q61124 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Cln3Q61124 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.93□□□□□ -1.46
Cln3Q61124 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Cln3Q61124 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cln3Q61124 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cln3Q61124 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.92□□□□□ -1.46
Cln3Q61124 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cln3Q61124 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.92□□□□□ -1.46
Cln3Q61124 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cln3Q61124 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms