Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm43230-201ENSMUST00000200980 2129 ntBASIC5.07□□□□□ -1.6
Ccdc88bQ4QRL3 Mir344c-201ENSMUST00000103919 92 ntBASIC5.07□□□□□ -1.6
Ccdc88bQ4QRL3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC5.07□□□□□ -1.6
Ccdc88bQ4QRL3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm21034-201ENSMUST00000207390 2608 ntBASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm21035-201ENSMUST00000207867 2608 ntBASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm20574-201ENSMUST00000182867 917 ntBASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc88bQ4QRL3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm22551-201ENSMUST00000157795 103 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm24213-201ENSMUST00000158255 258 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm23824-201ENSMUST00000158741 276 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Mir8096-201ENSMUST00000184526 127 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm28002-201ENSMUST00000184832 100 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm44519-201ENSMUST00000206486 122 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm6230-201ENSMUST00000208077 780 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.05□□□□□ -1.6
Ccdc88bQ4QRL3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm5123-201ENSMUST00000121905 837 ntBASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm5755-201ENSMUST00000152394 837 ntBASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm22227-201ENSMUST00000157356 259 ntBASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Gm29602-201ENSMUST00000186887 442 ntBASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88bQ4QRL3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc88bQ4QRL3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Gm22849-201ENSMUST00000157713 307 ntBASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 AC166113.1-201ENSMUST00000225258 475 ntBASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Mir184-201ENSMUST00000083662 69 ntBASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc88bQ4QRL3 Gm11363-201ENSMUST00000121672 548 ntBASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Mir5123-201ENSMUST00000177794 83 ntBASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Gm6140-201ENSMUST00000192494 966 ntBASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Gm46436-201ENSMUST00000221851 1294 ntBASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Gm44157-201ENSMUST00000204720 410 ntBASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ccdc88bQ4QRL3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms