Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm3338-201ENSMUST00000220982 269 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm23623-201ENSMUST00000082461 107 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm25578-201ENSMUST00000083406 104 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm11252-201ENSMUST00000120572 939 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm12340-201ENSMUST00000121617 462 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm24635-201ENSMUST00000122712 128 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm25292-201ENSMUST00000122797 322 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm5963-201ENSMUST00000143451 236 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm24251-201ENSMUST00000157324 114 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm23824-201ENSMUST00000158741 276 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm22367-201ENSMUST00000178930 132 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm6900-201ENSMUST00000178971 342 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm45857-201ENSMUST00000212207 356 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm23464-201ENSMUST00000083145 147 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col28a1Q2UY11 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm22472-201ENSMUST00000104115 134 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm25876-201ENSMUST00000104329 119 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm12492-201ENSMUST00000117665 564 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm12719-201ENSMUST00000118859 241 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm11798-201ENSMUST00000119150 421 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm15452-201ENSMUST00000119877 240 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm14238-201ENSMUST00000120227 323 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm14649-201ENSMUST00000121814 324 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24507-201ENSMUST00000157683 134 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm25525-201ENSMUST00000177701 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm26178-201ENSMUST00000177706 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm26465-201ENSMUST00000178517 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24317-201ENSMUST00000178536 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm25021-201ENSMUST00000179184 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm22995-201ENSMUST00000179670 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24424-201ENSMUST00000179714 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm24389-201ENSMUST00000179962 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm25672-201ENSMUST00000180111 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm29163-201ENSMUST00000188029 107 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm29634-201ENSMUST00000188467 696 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm28699-201ENSMUST00000189193 696 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm8823-201ENSMUST00000193158 433 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm43604-201ENSMUST00000199799 705 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm44650-201ENSMUST00000206929 194 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm18672-201ENSMUST00000208035 270 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm18462-201ENSMUST00000208112 417 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.16□□□□□ -1.74
Col28a1Q2UY11 Gm19599-201ENSMUST00000218898 358 ntBASIC4.16□□□□□ -1.74
Col28a1Q2UY11 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms