Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22502-201ENSMUST00000082488 107 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm24149-201ENSMUST00000082757 107 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gm22229-201ENSMUST00000082987 108 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col6a1Q04857 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.6□□□□□ -1.51
Col6a1Q04857 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a1Q04857 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a1Q04857 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm7657-201ENSMUST00000118851 666 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm15167-201ENSMUST00000121997 187 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm7846-201ENSMUST00000145844 274 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm25334-201ENSMUST00000158036 110 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm24729-201ENSMUST00000158225 137 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Mir6960-201ENSMUST00000183449 61 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm27161-201ENSMUST00000183960 562 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm28390-201ENSMUST00000185212 700 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm37878-201ENSMUST00000192108 387 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm44870-201ENSMUST00000207291 357 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm17990-201ENSMUST00000211728 553 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a1Q04857 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm22572-201ENSMUST00000082985 105 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.59□□□□□ -1.51
Col6a1Q04857 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a1Q04857 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.59□□□□□ -1.52
Col6a1Q04857 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.59□□□□□ -1.52
Col6a1Q04857 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a1Q04857 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.59□□□□□ -1.52
Col6a1Q04857 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a1Q04857 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm23691-201ENSMUST00000101878 107 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm13228-201ENSMUST00000118937 634 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm14815-201ENSMUST00000120060 488 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm5060-201ENSMUST00000120072 599 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm15177-201ENSMUST00000120491 577 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm25325-201ENSMUST00000122559 86 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm25103-201ENSMUST00000122671 318 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm25412-201ENSMUST00000180258 107 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm8941-201ENSMUST00000181451 899 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm27564-201ENSMUST00000185196 96 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm29229-201ENSMUST00000188874 323 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm37492-201ENSMUST00000191948 376 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm43355-201ENSMUST00000196541 346 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm4321-201ENSMUST00000200520 442 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a1Q04857 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a1Q04857 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm6177-201ENSMUST00000085589 465 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a1Q04857 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.58□□□□□ -1.52
Col6a1Q04857 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a1Q04857 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a1Q04857 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.57□□□□□ -1.52
Col6a1Q04857 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms