Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.1□□□□□ -1.75
NcanP55066 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.09□□□□□ -1.75
NcanP55066 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 Fus-202ENSMUST00000079045 2623 ntBASIC4.09□□□□□ -1.75
NcanP55066 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NcanP55066 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NcanP55066 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.09□□□□□ -1.75
NcanP55066 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 Mir706-201ENSMUST00000102262 84 ntBASIC4.09□□□□□ -1.75
NcanP55066 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NcanP55066 Gm23011-201ENSMUST00000104148 132 ntBASIC4.09□□□□□ -1.75
NcanP55066 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NcanP55066 Gm13478-201ENSMUST00000118312 413 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm11704-201ENSMUST00000120031 214 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm11233-201ENSMUST00000122357 634 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm12998-201ENSMUST00000122445 789 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.09□□□□□ -1.75
NcanP55066 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.09□□□□□ -1.75
NcanP55066 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.09□□□□□ -1.75
NcanP55066 Gm26320-201ENSMUST00000157742 306 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm24675-201ENSMUST00000158757 259 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm20399-201ENSMUST00000174652 132 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm25707-201ENSMUST00000175120 96 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm24754-201ENSMUST00000177997 107 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm28466-201ENSMUST00000190678 659 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm37219-201ENSMUST00000192036 926 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.09□□□□□ -1.75
NcanP55066 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NcanP55066 Gm45551-201ENSMUST00000211459 928 ntBASIC4.09□□□□□ -1.75
NcanP55066 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.09□□□□□ -1.75
NcanP55066 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.09□□□□□ -1.75
NcanP55066 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.09□□□□□ -1.75
NcanP55066 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.09□□□□□ -1.75
NcanP55066 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.09□□□□□ -1.75
NcanP55066 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC4.09□□□□□ -1.75
NcanP55066 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.09□□□□□ -1.75
NcanP55066 AC117656.3-204ENSMUST00000225656 859 ntBASIC4.09□□□□□ -1.75
NcanP55066 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.09□□□□□ -1.75
NcanP55066 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NcanP55066 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NcanP55066 Gm25205-201ENSMUST00000082841 103 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.09□□□□□ -1.75
NcanP55066 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NcanP55066 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NcanP55066 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NcanP55066 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NcanP55066 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
NcanP55066 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NcanP55066 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
NcanP55066 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NcanP55066 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NcanP55066 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm2003-201ENSMUST00000118537 636 ntBASIC4.08□□□□□ -1.76
NcanP55066 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm7421-201ENSMUST00000119298 639 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm14989-201ENSMUST00000120497 207 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm7365-201ENSMUST00000120877 639 ntBASIC4.08□□□□□ -1.76
NcanP55066 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm1989-201ENSMUST00000126244 636 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm11281-201ENSMUST00000141391 576 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm25557-201ENSMUST00000158084 315 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm24734-201ENSMUST00000158860 262 ntBASIC4.08□□□□□ -1.76
NcanP55066 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NcanP55066 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 Gm29556-201ENSMUST00000187591 696 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 Gm22897-201ENSMUST00000197860 128 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm25820-201ENSMUST00000198589 127 ntBASIC4.08□□□□□ -1.76
NcanP55066 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NcanP55066 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm18704-201ENSMUST00000219736 446 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm6171-201ENSMUST00000220760 645 ntBASIC4.08□□□□□ -1.76
NcanP55066 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.08□□□□□ -1.76
NcanP55066 Gm30738-201ENSMUST00000221346 502 ntBASIC4.08□□□□□ -1.76
NcanP55066 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.08□□□□□ -1.76
NcanP55066 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.08□□□□□ -1.76
NcanP55066 AC162934.3-201ENSMUST00000223015 841 ntBASIC4.08□□□□□ -1.76
NcanP55066 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.08□□□□□ -1.76
NcanP55066 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.08□□□□□ -1.76
NcanP55066 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NcanP55066 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.08□□□□□ -1.76
NcanP55066 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NcanP55066 Mir30e-201ENSMUST00000083475 92 ntBASIC4.08□□□□□ -1.76
NcanP55066 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NcanP55066 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
NcanP55066 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NcanP55066 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NcanP55066 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NcanP55066 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.08□□□□□ -1.76
NcanP55066 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NcanP55066 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms