Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm3123-201ENSMUST00000163480 480 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm27896-201ENSMUST00000175162 317 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Mir7056-201ENSMUST00000183776 59 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm27387-201ENSMUST00000184583 116 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm27477-201ENSMUST00000184649 143 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm5372-201ENSMUST00000187540 409 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm32300-201ENSMUST00000221735 515 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm35558-202ENSMUST00000221819 499 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.39□□□□□ -1.87
Nkx2-1P50220 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx2-1P50220 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14517-201ENSMUST00000119040 337 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14875-201ENSMUST00000120881 319 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm15075-201ENSMUST00000122187 477 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm13868-201ENSMUST00000122411 294 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm22107-201ENSMUST00000122548 100 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm11281-201ENSMUST00000141391 576 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm25278-201ENSMUST00000157267 120 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm23702-201ENSMUST00000158840 130 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm3053-201ENSMUST00000161709 616 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm27342-201ENSMUST00000183530 109 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm28356-202ENSMUST00000187566 858 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm43096-201ENSMUST00000196173 421 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm43070-201ENSMUST00000196938 415 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm36259-201ENSMUST00000197340 392 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm43245-201ENSMUST00000197603 468 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Mir7682-201ENSMUST00000198467 58 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm45458-201ENSMUST00000209900 522 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm10704-201ENSMUST00000098952 730 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Nkx2-1P50220 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx2-1P50220 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.38□□□□□ -1.87
Nkx2-1P50220 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms