Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14142-201ENSMUST00000117833 296 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm7363-201ENSMUST00000119883 399 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm12768-201ENSMUST00000120055 759 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm14577-201ENSMUST00000121134 256 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm23837-201ENSMUST00000122656 286 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm6058-201ENSMUST00000154261 399 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm23965-201ENSMUST00000157969 142 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm26426-201ENSMUST00000177866 123 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm25671-201ENSMUST00000178612 105 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm23307-201ENSMUST00000179167 105 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm25286-201ENSMUST00000179790 105 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm26060-201ENSMUST00000180094 123 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm26731-201ENSMUST00000180683 543 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm26746-201ENSMUST00000181722 487 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm38044-201ENSMUST00000192964 487 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm45249-201ENSMUST00000211021 348 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm7189-201ENSMUST00000119811 429 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm14049-201ENSMUST00000121009 636 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm24371-201ENSMUST00000122662 267 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm25806-201ENSMUST00000122782 122 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm27960-201ENSMUST00000183445 184 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Mir7222-201ENSMUST00000183740 75 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm27385-201ENSMUST00000184747 104 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm19206-201ENSMUST00000186401 827 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm9480-201ENSMUST00000198038 616 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Mir6906-201ENSMUST00000198998 58 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm18791-201ENSMUST00000204611 726 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm45523-201ENSMUST00000210712 799 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm45735-201ENSMUST00000212779 319 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm8158-201ENSMUST00000219220 465 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm8249-201ENSMUST00000219225 465 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm8112-201ENSMUST00000219637 465 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm10038-201ENSMUST00000077233 441 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm25260-201ENSMUST00000083053 134 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Gm25793-201ENSMUST00000083287 107 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Mir342-201ENSMUST00000083502 99 ntBASIC4.59□□□□□ -1.67
Pcdh1F7BJK1 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Pcdh1F7BJK1 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Pcdh1F7BJK1 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.59□□□□□ -1.68
Pcdh1F7BJK1 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Pcdh1F7BJK1 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms